Biological Pest Control Basics

Biological pest control

Written by Mike Bonds

Biological pest control
Lady beetle, by Scott Bauer. (Wikimedia Commons)

Managing pests is an important part of cultivating plants whether you are tending a small garden in your yard or several fields of crops. Insect predators can make short work of healthy plants, particularly if insect predators are in abundance. The good news is that there are natural ways to combat these pests that growers have been utilizing for many years. Granted, not all solutions are created equal. There are a number of reasons why biological control efforts may fail; including breeding being out of sync or the countermeasure not being strong enough.
The primary points of biological pest control are:

  • Classic Biological Control
  • Conservation
  • Augmentation

Each offers its own pros and cons with success hinging on a large number of factors that is impossible to completely define. Even still, these methods have traditionally been effective for a number of growers and have been used since the dawn of farming. Continue reading “Biological Pest Control Basics”

NY Times on Saving the Orange

The orange groves in Florida are in trouble. A disease called Citrus Greening is destroying the fruit, the trees, and the future of the industry in the state. Scientists are turning to genetic engineering to create a solution to this problem, but will it work, and will people accept it? Amy Harmon excellently tells the story at the New York Times.

A Race to Save the Orange by Altering Its DNA

Frank-green-orange
Frank wants to save the oranges

CLEWISTON, Fla. — The call Ricke Kress and every other citrus grower in Florida dreaded came while he was driving.

“It’s here” was all his grove manager needed to say to force him over to the side of the road.

The disease that sours oranges and leaves them half green, already ravaging citrus crops across the world, had reached the state’s storied groves. Mr. Kress, the president of Southern Gardens Citrus, in charge of two and a half million orange trees and a factory that squeezes juice for Tropicana and Florida’s Natural, sat in silence for several long moments.

“O.K.,” he said finally on that fall day in 2005, “let’s make a plan.”

Fill a glass full of orange juice, and give it a good read, and let us know what you think.

Coffee the next crop to be saved by Transgenics?

Written by Caroline Coatney

Coffee rust, by Phil A. Arneson

As I was drinking my morning cup of coffee the other day, I got an email from a friend about a Wired article describing the dire straits the coffee crop has found itself in and how transgenics could be a possible savior. Putting down my cup of joe, I started investigating what was going on with the coffee crop and what might happen to my future cups of coffee.
The Coffee Rust Problem
It seems coffee farmers are up against a large-scale affliction from the leaf-blighting fungus known as coffee rust (Hemileia vastatrix). Historically, coffee rust has been a recurring problem across the globe. It wreaked havoc in Sri Lanka, the Philippines, Java, and Malaya during the 1880s and 1890s and then spent the next hundred years making its way across the world and infecting nearly all coffee growing areas in the western hemisphere. General management practices have included building wind breaks (the spores of the fungus are wind and rain dispersed), spraying fungicides, and quarantining sick plants and killing all neighboring plants in the vicinity.
These practices seem to have worked more or less in the past, but they are inadequate against today’s current pandemic. Continue reading “Coffee the next crop to be saved by Transgenics?”

Interview with Dr. Gia Aradottir

In England, there is an important experiment underway. A research group at the Rothamsted Research station in Harpenden, is testing a variety of wheat that has been genetically engineered to scare away aphid pests. If successful, the experiment could demonstrate the effectiveness of a novel, environmentally-friendly way to manage pests.

However, a protest group is threatening the ability of the researchers to continue their project, and there have been a lot of claims made about the research. To help shed some light on this experiment, I interviewed Dr. Gia Aradottir, a biologist who is involved in the project.

KJHvM: Can you tell us a bit about yourself and how you came to work at Rothamsted and on this project? What is your role in the project?

GA: I’m the newest member of the GM wheat team, I joined the E-β-farnesene project a year and a half ago. I did my PhD jointly at Rothamsted Research and Imperial College London where my work focused on the giant willow aphid (Tuberolachnus salignus), chemical ecology and population genetics. My PhD project was partly supervised by the chemical ecology group and when I had the opportunity to join, I jumped at the chance.

We have a fantastic team of people working together, and a lot of interdisciplinary possibilities with the different departments within Rothamsted and the wider scientific community. We work on a number of projects, and my contribution to this particular project has been insect behavioural studies and analysis of the volatile profiles of the GM wheat.

KJHvM: Can you explain the experiment for our readers? What is the nature of the trait, how it works, and how it could change wheat production if it is successful? How important is this research?

GA: I like to say that we are helping plants to protect themselves against insects. The trait engineered into the wheat plant is the volatile emission of the aphid alarm pheromone (E)-β-farnesene (EBF).

Semiochemicals such as EBF are chemical messages which are used generally by insects and in this case by aphids, both in gathering information about their environment and in signalling to each other. When an aphid is attacked by a predator it emits EBF from its cornicles, which is recognised by the other aphids as an alarm pheromone, so they can escape. (E)-β-farnesene is present in many plant species, but is normally emitted in combination with other plant volatile organic compounds (VOCs). Research by our group has shown the importance of blends and ratios of plant VOCs to insect responses, and the fact that wheat emits almost no other volatiles means that we can fool the aphids into thinking the wheat emitted EBF comes from a fellow aphid.

Rhopalosiphum padi is afraid, very afraid.

The second line of defence comes from aphid predators that have come to recognise EBF as a cue that there are aphids in the area, and are attracted in by the aphid alarm signal. We have tested insect responses to two GM events in the lab, where we observed very good responses to the traits by both aphids and predators. If this works equally well in the field, this wheat would be protected against the diseases and yield losses caused by aphids. This would reduce the need for chemical input by the farmer, avoid collateral damage of beneficial insects caused by use of insecticides, and contribute to sustainable agriculture.

KJHvM: How is this strategy different from the kinds of GE traits that people may be more familiar with? Can traits like this be employed in a large number of crops?

GA: This method would affect the behaviour of the insect by changing the way the plant smells, making it avoid its host-plant, and is therefore a non-toxic method of pest management. The reason this could work well in the aphid-wheat system is because wheat doesn’t emit many other VOCs, so the aphid perceives it as a pure alarm pheromone. It might be possible to use similar traits in other insect-plant systems, but as pest insects often specialise on only one or few host-plants, and the volatile profile of each plant species is different, each system would need to be studied separately.

KJHvM: What kinds of other changes might happen to the wheat as a result of this new trait? Does it alter the flavor, texture, yield, or other properties of the plants? What do you know about this genetically engineered wheat already, and what are you hoping to achieve with the trial?

GA: There are no phenotypic changes in the GM wheat plants compared with the control plants. Over 400 plants already produce EBF. Three new proteins are made by the GM plants which are all widely occurring in nature, non-toxic and non-allergenic, posing no safety concerns that we know of.

The proteins are (E)-β-farnesene synthase, farnesyl pyrophosphate synthase and phosphinothricin acetyltransferase. The first two are common proteins found in many organisms (some that are part of the food and feed chains). The third is a bacterial protein used as a selectable marker but is not needed for aphid resistance and could be removed before commercialisation.

We will do further measurements on the quality, yield etc at the harvest of the field trial. We have had very positive results in laboratory experiments and by doing this trial in field conditions we want to establish whether the EBF emission by the wheat plants significantly alters aphid behaviour, repelling them away from the plants, as well as attracting aphid predators into the crop in an open air situation. This has the potential to become a non-toxic method of pest control.

KJHvM: What kinds of changes might be expected to happen with aphid populations? What do we know about the ability of aphids to adapt to constant exposure to this pheromone?

GA: Our field trial is only being conducted at a very small scale. There are only eight 6x6m plots of GM wheat planted, so this will not have any effect on aphid populations. At present aphids are controlled using pesticides, which do collateral damage to other beneficial insects, such as ladybirds and parasitic wasps. Any pest management system will eventually experience a level of resistance.

However, in this case the level of defence is twofold, if the aphids become habituated to their own alarm pheromone they would not be able to warn each other of danger. Because adapted aphids would be more vulnerable to predators, there will be a selective pressure on the aphids to keep responding to the alarm pheromone.

(Editor’s Note: This paper describes how one aphid species experiences fitness costs after becoming habituated to E-β-farnesene. Fearless aphids get eaten by Ladybugs. Also see this video that shows how aphids react to this pheromone.)

KJHvM: There has been some confusion about the nature of the genetic change. I understand that one gene came from peppermint, but some people have been talking about its similarity to a gene from cows. Can you unravel this confusion? Is the sequence publicly available for making comparisons?

GA: Our plants contain two functional, codon-optimised, synthetic genes but the ACRE (UK Advisory Committee on Releases to the Environment) consent process specifically requires the applicant to name the ‘source organism’ of the genes being transferred. We questioned this exact point with ACRE and, although the DNA added to wheat was chemically-synthesised and not actually taken from any organism, we were required to name the closest match in our application.

The EBF synthase gene is based on the peppermint gene and that is the closest match. We purposefully chose an animal form of the FPP synthase gene because there was evidence that the enzyme would function more efficiently and that it was less likely to be down-regulated by the plant. We happen to base our synthetic FPP gene on a sequence that encodes the cow form of the enzyme, although FPP synthase is found in many animals and plants and we are currently looking to see whether plant versions would work just as effectively. Thus, there is a tiny piece of genetic material in one of our GM lines that has some sequence similarity with a cow gene. But it is not from a cow and was synthesised in the lab.

The field trial will compare the performance of that line with another line that only has the peppermint based gene. It may not be necessary to continue development of that line if the peppermint based gene is shown to perform well on its own.

We also need to keep in minds that this is an experimental system, to test a concept. It is not a plant that is being grown for food. Synthetic genes as this is common practice in molecular biology experiments now (quicker, cheaper and easier to use in an experimental system). The wheat from this experiment will be cultivated, measured and destroyed in accordance with stipulations made by ACRE. It is not designed for human consumption. Even if the experiment does repel aphids under field conditions as well as it has done under our extensive laboratory experiments (we will not know this until after the experiment), then many more years of continued carefully controlled experimentation will be required, including looking at the precise DNA sequences used. The actual sequence used in the GM plants has not been published yet, but will be included in a future publication.

Is Take the Flour Back pro-aphid?

KJHvM: I understand that a group of protesters calling themselves “Take the Flour Back” are objecting to this trial, and are threatening to vandalize the wheat on or before May 27. I also understand that a significant part of the budget is being spent on security. Was this response expected? Are you confident that you would be able to protect the trial?

GA: When we heard about the protest we contacted the organisers to ask if we could be of assistance on the day of protest and establish a dialogue. It was only later that we heard they were planning to destroy the experiment. If someone is intent on destroying the trial at any cost, they will find a way to do so. However, we hope that by appealing to the protesters and explaining the work we do, they will see the real benefits this could provide to sustainable agriculture in the future. It is upsetting to think that the work may be compromised, but we cannot go into the future building bigger fences around our research. We need to be able to conduct experiments openly in a safe and responsible manner. The plot is surrounded by a perimeter fence that has been erected to prevent the entry of rabbits, other large mammals, and unauthorised people to the site. There is also a security guard on duty at all times. The value of the whole project is £732.000 and an additional £245.000 was provided for security measures.

KJHvM: What progress has been made starting a dialogue with the protesting group?

GA: We sent a letter and a video message to the protesters, asking them to reconsider their planned attack on our experiment. They have written back to us saying they would welcome the opportunity to engage in a public debate with us. We have contacted them twice since to arrange a public debate, but are still awaiting a reply.

Support GM Wheat Trials
Frank won’t sleep until the wheat is safe!

KJHvM: What can scientists and other supporters do to show their support, or even help on May 27 (or after) if the protesters ultimately decide to try to destroy the experiment? Will there be a counter-protest?

GA: We are very grateful for all the support we have received from the public which has included people from all walks of life not just scientists. The best way for people to show their support is by signing the petition that sense about science started upon seeing our video and letter.

I do not think a counter protest on the day, however well-meaning, will actually help as it is likely to increase tensions and confuse issues. We recommend that anyone who wants to support us does not come down on the day, but instead show their support via other channels before the protest day. A handful of our scientists will be available on the day to engage in dialogue with the protesters and we will do what we can to facilitate a peaceful protest. We should leave it in the very capable hands of the police who will deal with anyone who breaks the law.

KJHvM: Where can people go to find out more information?

GA: General information about the trial can be found on the Rothamsted Research website. Here are also links to the key publications on the project in Nature, PNAS, Journal of Experimental Botany, and Journal of Chemical Ecology.

And finally, here is a link to our petition where we ask people to support our right to conduct research without the threat of it being destroyed.

KJHvM: Some of these questions came from the Biofortified Blog community, and I have also asked Dr. Aradottir to stick around for the discussion and help address any other questions our readers might have. Her research group is very busy both with their experiments and also with the enormous amount of media attention that this experiment has attracted. (I signed their online petition when there were only 30 people on it, and now supporters number over 4,000.) We are very lucky to have this kind of detailed information during this developing story, and for that I am very thankful to Dr. Aradottir and everyone else who contributed.

Manhattan project of Entomology

Entomologists Launch 5,000 Insect Genome Project (i5k) | Entomological Society of America (ESA)

Entomologists Launch 5,000 Insect Genome Project (i5k)

Lanham, MD; June 15, 2011 – It’s been called “the Manhattan Project of Entomology,” an undertaking that has the potential to revolutionize the way we think about insects.

The i5k Initiative, also known as the 5,000 Insect Genome Project, was recently launched with a letter to Science (http://www.sciencemag.org/content/331/6023/1386.citation) from ten signers known as the i5k Ad Hoc Launch Group. Now the latest issue of American Entomologist features an interview with four of the signers about the project’s origins, purpose, and goals.

The Initiative aims to sequence the genomes of 5,000 insects and other arthropods over the next five years in order to “improve our lives by contributing to a better understanding of insect biology and transforming our ability to manage arthropods that threaten our health, food supply, and economic security.”
Continue reading “Manhattan project of Entomology”

There are a lot of different ways for Bt proteins to get into our food

The insect pest protection protein called Bt deployed in many genetically manipulated crops is hitting the news again.

Since Marcel Kuntz’ posting on the alleged detection of this protein Bt  (variety Cry1Ab) in tissues of women, including pregnant women, as claimed by Aziz Aris and Samuel Leblanc, discussion of the Aris-Leblanc scientific paper making this claim has been gaining much print-media and Internet blogger attention.

Besides doubts about whether there is any validity in the Bt detection method used to claim presence of this protein in women’s  blood and  umbilical tissues, as well discussed by Marcel Kuntz, the Aris-Leblanc paper raises a largely unanswered question of what are the sources of exposure to Bt proteins in the human diet?

It turns out that there are plenty of other sources of dietary Bt protein in addition to genetically modified crops modified to contain the protein. It is present in biopesticides used by organic farmers.

Continue reading “There are a lot of different ways for Bt proteins to get into our food”

Pollen defences used to protect corn and cotton against fungus damage

Flower power to help improve corn yield › News in Science (ABC Science)

Flower power to help improve corn yield
Wednesday, 4 May 2011 Anna Salleh
Reposted from ABC Radio Australia
Genes normally only active in the flowers of plants could be used to protect the whole plant from resist fungal disease, say Australian researchers.
Professor Marilyn Anderson of La Trobe University is presenting her work at an Australian Academy of Science seminar in Canberra today.
Anderson and colleagues in agricultural biotechnology company Hexima are working together with seed giant Pioneer to develop transgenic corn that is resistant to the major fungal diseases that decrease yield.
“With climate change and growing population, we know that within the next couple of decades we’re going to have to increase cereal production by 70 per cent,” says Anderson. “So all companies are looking at ways to improve the yield of grains, especially rice, corn and wheat.”
Continue reading “Pollen defences used to protect corn and cotton against fungus damage”

Release of sterilised moths avoids the need for refuges in cotton growing

 Success in integrated pest management of pink boll worm in Arizona provides encouraging news for both the environment and for cotton growers. A two-pronged strategy involving insect protected cotton and biological control with wide scale release of sterile moths virtually eliminates resistance to the genetically inbuilt cotton insect protection system in pink boll worm pests.

Continue reading “Release of sterilised moths avoids the need for refuges in cotton growing”

Transgenic corn’s resistance to pests has benefited even non-transgenic corn

Genetically modified crop resistance to pests benefits non-modified crop, U of Minnesota study finds

Areawide suppression dramatically reduced the estimated $1 billion in annual losses caused by European corn borer

Transgenic corn’s resistance to pests has benefited even non-transgenic corn, a new study led by scientists from the University of Minnesota shows.

The study, published in the Oct. 8 edition of the journal Science, found that widespread planting of genetically modified Bt corn throughout the Upper Midwest has suppressed populations of the European corn borer, historically one of corn’s primary pests. This areawide suppression has dramatically reduced the estimated $1 billion in annual losses caused by the European corn borer, even on non-genetically modified corn. Bt corn, introduced in 1996, is so named because it has been bred to produce a toxin from the soil bacterium Bacillus thuringiensis (Bt) that kills insect pests.

Continue reading “Transgenic corn’s resistance to pests has benefited even non-transgenic corn”

African GM cowpea potentially huge boost for local farmers

Scientists claim GM cowpea could generate US$1 billion
Busani Bafana, SciDEv net
1 October 2010

The cowpea is emerging as an important food crop

[SALY, SENEGAL] A pest-resistant version of the black-eyed pea, a subspecies of the cowpea, is on track for commercial introduction, promising higher yields and claimed savings of up to US$1 billion on a crop that has found new popularity among African smallholders.

Continue reading “African GM cowpea potentially huge boost for local farmers”